People: Faculty

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

A


Mark Akeson
Chair, Biomolecular Engineering
Professor, Biomolecular Engineering

831-459-1038
Physical Sciences, Room 408
Mail Stop SOE2
Office Hours: Wednesday 2-4 pm. Appointments (~15 min) strongly recommended (contact makeson@soe.ucsc.edu)
Research Areas:

DNA structure and dynamics, single molecule biophysics, bioethics, nanopore technology


B


Phillip Berman Phillip Berman
Jack Baskin Endowed Professor, Biomolecular Engineering

831-459-3529
Physical Sciences, Room 405E
Mail Stop SOE2
Research Areas:

Drug development, vaccines, AIDS, monoclonal antibody therapeutics, immunology, molecular cell/biology, recombinant protein production (commercial scale)


D


David Deamer David Deamer
Research Professor, Biomolecular Engineering

831-459-5158
Physical Sciences, Room 405B
Mail Stop SOE2
Research Areas:

Membrane biophysics, nanopore analysis, DNA sequencing, biomolecular self-assembly.


F


Camilla Forsberg Camilla Forsberg
Assistant Professor, Biomolecular Engineering

831-459-2111
Physical Sciences, Room 310
Mail Stop SOE2
Research Areas:

Hematopoietic stem cells, transcriptional regulation; chromatin; blood cell development; cell surface receptors; genomics


G


Dietlind Gerloff Dietlind Gerloff
Assistant Professor, Biomolecular Engineering

831-459-4833
Physical Sciences, Room 320
Mail Stop SOE2
Research Areas:

Protein to protein interactions, protein function prediction, functional genomics, protein structure prediction


Richard Edward Green Richard Edward Green
Assistant Professor, Biomolecular Engineering

831-502-7394
Physical Sciences, Room 312
Mail Stop SOE2
Research Areas:

Genomics, computational molecular biology, genome assembly, human evolutionary genetics, ancient DNA, high-throughput sequencing, mRNA-processing and alternative splicing


H


David Haussler David Haussler
Investigator, Howard Hughes Medical Institute
Director, Center for Biomolecular Science and Engineering
Distinguished Professor, Biomolecular Engineering

831-459-2105
Engineering 2, Room 501A
Mail Stop CBSE/ITI
Office Hours: By Appointment
Research Areas:

Cancer genomics, immunogenomics, molecular evolution, neurodevelopment, comparative genomics, bioinformatics, computational molecular biology, statistical models, machine learning , neural networks


Richard Hughey Richard Hughey
Vice Provost and Dean of Undergraduate Education
Chair, B.S. in Bioengineering
Professor, Biomolecular Engineering
Professor, Computer Engineering

831-459-4908
Kerr Hall
Mail Stop SOE3
Office Hours: By appointment: mfaluffi@ucsc.edu
Research Areas:

Bioinformatics, Hidden Markov Models, Computer Architecture, Parallel Computation


K


Kevin Karplus Kevin Karplus
Professor, Biomolecular Engineering

831-459-4250
Physical Sciences, Room 318
Mail Stop SOE2
Office Hours: By appointment only
Research Areas:

Genome assembly from next-generation sequence data. (Formerly protein structure prediction)


Brian Kidd Brian Kidd
Lecturer, Biomolecular Engineering

Physical Sciences, Room 405A
Research Areas:

Statistical modeling of multidimensional datasets, creating data-driven models for personalized medicine


L


Todd M. Lowe Todd M. Lowe
Associate Professor, Biomolecular Engineering

831-459-1511
Physical Sciences Building 316
Mail Stop SOE2
Office Hours: Monday 1-2pm, Wednesday 11am-Noon, and by email appt.
Research Areas:

Experimental and computational genomics, non-coding RNA gene finders, high-throughput small RNA sequencing, small RNA roles in cancer, evolution of RNA-based gene regulation


P


Nader Pourmand Nader Pourmand
Associate Professor, Biomolecular Engineering
Director, UCSC Genome Sequencing Center

831-502-7315
Baskin Engineering, Room 261B
Mail Stop SOE2
Office Hours: By appointment
Research Areas:

Bioelectronics, Biosensors, chemosensors, nanotechnology, single cell characterization, sequencing, genotyping, pathogen detection, DNA fingerprinting


R


Wendy Rothwell Wendy Rothwell
Lecturer, Biomolecular Engineering

831-459-1623
Physical Sciences, Room 405A
Mail Stop SOE2
Office Hours: MWF 2pm-3pm
Research Areas:

Biotechnology, molecular genetics


S


Josh Stuart Josh Stuart
Associate Professor, Biomolecular Engineering

831-459-1344
Physical Sciences, Room 308
Mail Stop SOE2
Office Hours: Tuesdays and Thursdays, 10:00 pm - 11:00 am
Research Areas:

Computational functional genomics, comparative analysis of gene regulation, cross-species inference of gene networks, probabilistic graphical models, cancer genomics


T


Jonathan Trent Jonathan Trent
Adjunct Professor, Biomolecular Engineering

Physical Sciences, Room 405C
Mail Stop SOE2
Research Areas:

Organic aggregates, marine snow, microbial physiology, microenvironments, robust proteins, genetic engineering for nanotechnology


V


Boaz Vilozny Boaz Vilozny
Postdoctoral Scholar, Biomolecular Engineering
Lecturer, Biomolecular Engineering

831-459-4382 (Office)
Baskin Engineering, Room 206
Mail Stop SOE2
Office Hours: By appointment

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